PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KFK29777.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis
Family WRKY
Protein Properties Length: 313aa    MW: 35018.1 Da    PI: 7.6414
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KFK29777.1genomeMPIPBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY92.14.2e-29179237158
                 ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnh 58 
                 ++Dgy+WrKYGqK+ ++++ pr+Y+rC++a +Cpvkkkv+rsae+p++++ tYeg Hnh
  KFK29777.1 179 VKDGYQWRKYGQKVTRDNPSPRAYFRCSFApSCPVKKKVQRSAENPSLLVATYEGMHNH 237
                 58***************************99**************************** PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.5E-27173238IPR003657WRKY domain
SuperFamilySSF1182901.31E-24176238IPR003657WRKY domain
SMARTSM007745.0E-33179239IPR003657WRKY domain
PfamPF031061.4E-23180237IPR003657WRKY domain
PROSITE profilePS5081125.316181240IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0002237Biological Processresponse to molecule of bacterial origin
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009751Biological Processresponse to salicylic acid
GO:0010200Biological Processresponse to chitin
GO:0042742Biological Processdefense response to bacterium
GO:0050691Biological Processregulation of defense response to virus by host
GO:0050832Biological Processdefense response to fungus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042802Molecular Functionidentical protein binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    Send to blast
MDCSLDISLD LNTNPFNHHD FSDKLPKKEV SVLNSAKLET KWLVKDESAS ELREELNRVN  60
SENKKLTEML ATVCEKYYLL QNHLEKLQSR KSPDLDQTEQ PTRKRKQDHD EFLGFPIGLA  120
SGKTENSSSN EDHHHLQQQQ HEQKNQLLTC KGPVTDTFNK AKVSTVYVPA DASDTSLTVK  180
DGYQWRKYGQ KVTRDNPSPR AYFRCSFAPS CPVKKKVQRS AENPSLLVAT YEGMHNHLGP  240
NASEGDASSQ VGSSTVTLDL VQGGHRLGSE KNERGTIQEL LVQQMATSLT KDSKFTAALA  300
AAISGRLMEQ SRT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-191792401474WRKY transcription factor 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1101106TRKRKQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00465DAPTransfer from AT4G31800Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006412553.11e-179hypothetical protein EUTSA_v10025785mg
SwissprotQ9C5T40.0WRK18_ARATH; WRKY transcription factor 18
TrEMBLA0A087GIS50.0A0A087GIS5_ARAAL; Uncharacterized protein
STRINGAT4G31800.11e-178(Arabidopsis thaliana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM65841945
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31800.11e-175WRKY DNA-binding protein 18